Table S1, related to Figure 2 J: Top ten DEGs Human sorted Spermatogonia
HERMANN, Brian P., et al. The mammalian spermatogenesis single-cell transcriptome, from spermatogonial stem cells to spermatids. Cell reports, 2018, 25. Jg., Nr. 6, S. 1650-1667. e8.
Publication: https://doi.org/10.1016/j.celrep.2018.10.026
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The publication The Mammalian Spermatogenesis Single-Cell Transcriptome, from Spermatogonial Stem Cells to Spermatids by Brian P. Hermann, Keren Cheng, Anukriti Singh, Lorena Roa-De La Cruz, Kazadi N. Mutoji, I-Chung Chen, Heidi Gildersleeve, Jake D. Lehle, Max Mayo, Birgit Westernströer, Nathan C. Law, Melissa J. Oatley, Ellen K. Velte, Bryan A. Niedenberger, Danielle Fritze, Sherman Silber, Christopher B. Geyer, Jon M. Oatley, John R. McCarrey is published under an open access no derivatives license: : https://creativecommons.org/licenses/by-nc-nd/4.0/. Granted rights: share — copy and redistribute the material in any medium or format. No alterations allowed. Thus, tables can not be shown in MFGA format.
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Table
| GENE | PVALUE | No | Avg_logfc | Pct.1 | Pct.2 | P_val_adj | Cluster |
|---|---|---|---|---|---|---|---|
| PABPC4 | 0.000000e+00 | 1 | 0.932897379491436 | 0.989 | 0.905 | 0 | 1 |
| SRSF9 | 0.000000e+00 | 2 | 0.532186141270345 | 0.995 | 0.941 | 0 | 1 |
| RPL41 | 0.000000e+00 | 3 | 0.525031602829325 | 1 | 0.988 | 0 | 1 |
| FTL | 4.550000e-305 | 4 | 0.578144261564179 | 0.996 | 0.942 | 1.29E-300 | 1 |
| CIRBP | 1.220000e-301 | 5 | 0.535559398502477 | 0.989 | 0.873 | 3.45E-297 | 1 |
| CST3 | 2.340000e-260 | 6 | 0.550790048728986 | 0.995 | 0.852 | 6.63E-256 | 1 |
| PFN1 | 3.870000e-260 | 7 | 0.541019965083261 | 0.99 | 0.809 | 1.10E-255 | 1 |
| WBSCR22 | 4.930000e-210 | 8 | 0.525982051955321 | 0.975 | 0.903 | 1.40E-205 | 1 |
| TCEA1 | 4.170000e-201 | 9 | 0.491406660337546 | 0.894 | 0.669 | 1.18E-196 | 1 |
| SOCS1 | 1.540000e-175 | 10 | 0.480033691292776 | 0.448 | 0.175 | 4.35E-171 | 1 |
| GAGE2A | 0.000000e+00 | 11 | 0.851813308513969 | 0.935 | 0.501 | 0 | 2 |
| EEF1A1 | 0.000000e+00 | 12 | 0.825565577889685 | 0.997 | 0.924 | 0 | 2 |
| GAGE12H | 0.000000e+00 | 13 | 0.79717497297844 | 0.864 | 0.212 | 0 | 2 |
| TPT1 | 0.000000e+00 | 14 | 0.757606905432858 | 1 | 0.999 | 0 | 2 |
| RPL7A | 0.000000e+00 | 15 | 0.71411388130814 | 0.999 | 0.998 | 0 | 2 |
| RPL10A | 0.000000e+00 | 16 | 0.650562510512045 | 0.993 | 0.945 | 0 | 2 |
| RPL9 | 0.000000e+00 | 17 | 0.643168761008674 | 1 | 0.995 | 0 | 2 |
| HSP90AA1 | 0.000000e+00 | 18 | 0.637119791215077 | 0.999 | 0.975 | 0 | 2 |
| L1TD1 | 1.220000e-278 | 19 | 0.764598903581738 | 0.831 | 0.404 | 3.47E-274 | 2 |
| ID1 | 2.310000e-185 | 20 | 0.719545024985714 | 0.867 | 0.558 | 6.55E-181 | 2 |
| MT-ND2 | 0.000000e+00 | 21 | 0.58027641052891 | 1 | 0.998 | 0 | 3 |
| UTF1 | 1.180000e-288 | 22 | 0.647227863607467 | 0.966 | 0.853 | 3.33E-284 | 3 |
| GLTSCR2 | 2.310000e-268 | 23 | 0.556982653676297 | 0.982 | 0.957 | 6.54E-264 | 3 |
| RPL18 | 9.390000e-260 | 24 | 0.501260008989415 | 0.994 | 0.998 | 2.66E-255 | 3 |
| PHGDH | 9.570000e-244 | 25 | 0.579533257972014 | 0.879 | 0.506 | 2.71E-239 | 3 |
| SURF2 | 6.890000e-231 | 26 | 0.49311341634342 | 0.981 | 0.949 | 1.95E-226 | 3 |
| HYAL2 | 1.110000e-190 | 27 | 0.496881575301131 | 0.916 | 0.747 | 3.13E-186 | 3 |
| SRRT | 1.340000e-189 | 28 | 0.505737975312892 | 0.871 | 0.589 | 3.80E-185 | 3 |
| TUBA1A | 1.910000e-185 | 29 | 0.507971402001751 | 0.885 | 0.566 | 5.40E-181 | 3 |
| C19orf84 | 1.130000e-172 | 30 | 0.494140815423094 | 0.935 | 0.57 | 3.21E-168 | 3 |
| DMRT1 | 0.000000e+00 | 31 | 1.18674668905276 | 0.974 | 0.543 | 0 | 4 |
| NANOS3 | 0.000000e+00 | 32 | 1.08762200616385 | 0.92 | 0.275 | 0 | 4 |
| PHF8 | 0.000000e+00 | 33 | 1.0051389314716 | 0.894 | 0.412 | 0 | 4 |
| ASB9 | 0.000000e+00 | 34 | 0.974645418498996 | 0.983 | 0.425 | 0 | 4 |
| TKTL1 | 0.000000e+00 | 35 | 0.890633488480033 | 0.982 | 0.782 | 0 | 4 |
| CDKN3 | 0.000000e+00 | 36 | 0.802527596555336 | 0.778 | 0.215 | 0 | 4 |
| C12orf75 | 0.000000e+00 | 37 | 0.79085015067631 | 0.991 | 0.852 | 0 | 4 |
| ERGIC3 | 0.000000e+00 | 38 | 0.774195016473544 | 0.962 | 0.596 | 0 | 4 |
| FTL | 0.000000e+00 | 39 | 0.728661947992692 | 0.999 | 0.945 | 0 | 4 |
| GAGE2A | 5.480000e-76 | 40 | 0.789913660554764 | 0.761 | 0.53 | 1.55E-71 | 4 |
| BCAP31 | 4.430000e-271 | 41 | 0.543150080784848 | 0.998 | 0.95 | 1.26E-266 | 5 |
| USP11 | 1.720000e-231 | 42 | 0.557055997446983 | 0.988 | 0.811 | 4.87E-227 | 5 |
| SMARCB1 | 2.470000e-226 | 43 | 0.528802450788444 | 0.995 | 0.95 | 7.00E-222 | 5 |
| DND1 | 5.230000e-206 | 44 | 0.544555107716106 | 0.904 | 0.566 | 1.48E-201 | 5 |
| GARS | 6.390000e-204 | 45 | 0.512350404169784 | 0.976 | 0.79 | 1.81E-199 | 5 |
| CNN1 | 7.250000e-203 | 46 | 0.549401382637993 | 0.94 | 0.678 | 2.05E-198 | 5 |
| UTF1 | 9.570000e-202 | 47 | 0.558509881541662 | 0.988 | 0.852 | 2.71E-197 | 5 |
| CCDC106 | 2.700000e-191 | 48 | 0.533768306062908 | 0.94 | 0.677 | 7.64E-187 | 5 |
| SCAMP2 | 9.190000e-190 | 49 | 0.507325111222923 | 0.932 | 0.675 | 2.60E-185 | 5 |
| ST3GAL4 | 4.090000e-182 | 50 | 0.526590506594003 | 0.913 | 0.575 | 1.16E-177 | 5 |
| RPL34 | 0.000000e+00 | 51 | 0.586466926290794 | 1 | 0.999 | 0 | 6 |
| SURF2 | 3.410000e-275 | 52 | 0.591942117011902 | 0.995 | 0.948 | 9.65E-271 | 6 |
| SMARCB1 | 7.190000e-260 | 53 | 0.585832738116156 | 0.996 | 0.95 | 2.04E-255 | 6 |
| ZNF428 | 3.800000e-246 | 54 | 0.55821445351631 | 0.997 | 0.986 | 1.08E-241 | 6 |
| TSPAN15 | 7.930000e-215 | 55 | 0.618385017034414 | 0.76 | 0.431 | 2.25E-210 | 6 |
| CCDC106 | 1.680000e-214 | 56 | 0.634738968542055 | 0.913 | 0.681 | 4.75E-210 | 6 |
| RP11-307P5.1 | 6.730000e-208 | 57 | 0.611327324093798 | 0.875 | 0.575 | 1.91E-203 | 6 |
| ST3GAL4 | 5.520000e-199 | 58 | 0.569934431456573 | 0.904 | 0.577 | 1.56E-194 | 6 |
| TOLLIP | 8.610000e-197 | 59 | 0.557461755365078 | 0.952 | 0.805 | 2.44E-192 | 6 |
| C19orf84 | 9.010000e-178 | 60 | 0.564739243345412 | 0.955 | 0.575 | 2.55E-173 | 6 |
| RPS2 | 2.800000e-302 | 61 | 0.624223873391943 | 1 | 0.999 | 7.92E-298 | 7 |
| GUK1 | 6.990000e-266 | 62 | 0.761802101840874 | 0.972 | 0.887 | 1.98E-261 | 7 |
| RPL32 | 3.220000e-255 | 63 | 0.649506710998649 | 1 | 1 | 9.13E-251 | 7 |
| RPL38 | 2.640000e-251 | 64 | 0.656520722714924 | 1 | 0.999 | 7.48E-247 | 7 |
| HES5 | 3.900000e-250 | 65 | 0.773831233335882 | 0.617 | 0.195 | 1.10E-245 | 7 |
| LIN7B | 2.350000e-201 | 66 | 0.670675663249793 | 0.973 | 0.863 | 6.67E-197 | 7 |
| SIGIRR | 2.480000e-189 | 67 | 0.685831950278589 | 0.908 | 0.735 | 7.03E-185 | 7 |
| CRIP2 | 1.450000e-167 | 68 | 0.626889832572217 | 0.901 | 0.642 | 4.11E-163 | 7 |
| HES4 | 9.130000e-166 | 69 | 0.91207646797457 | 0.735 | 0.432 | 2.59E-161 | 7 |
| SCT | 7.710000e-165 | 70 | 0.681458460801682 | 0.71 | 0.402 | 2.18E-160 | 7 |
| UBE2C | 0.000000e+00 | 71 | 1.33168986769588 | 0.745 | 0.237 | 0 | 8 |
| HIST1H4C | 0.000000e+00 | 72 | 1.32014934175241 | 0.993 | 0.78 | 0 | 8 |
| PTMA | 0.000000e+00 | 73 | 1.24321985941501 | 1 | 0.997 | 0 | 8 |
| DUT | 0.000000e+00 | 74 | 1.13096541564217 | 0.961 | 0.694 | 0 | 8 |
| TOP2A | 0.000000e+00 | 75 | 1.09772521931112 | 0.709 | 0.237 | 0 | 8 |
| BIRC5 | 0.000000e+00 | 76 | 1.05703986104684 | 0.791 | 0.27 | 0 | 8 |
| HMGN2 | 0.000000e+00 | 77 | 1.03492104328456 | 0.994 | 0.888 | 0 | 8 |
| MARCKSL1 | 0.000000e+00 | 78 | 1.02680666363464 | 0.984 | 0.787 | 0 | 8 |
| CALM3 | 0.000000e+00 | 79 | 1.00771727656781 | 0.959 | 0.65 | 0 | 8 |
| DEK | 0.000000e+00 | 80 | 0.977182275120097 | 0.972 | 0.702 | 0 | 8 |
| ZNF428 | 3.510000e-242 | 81 | 0.632701582745113 | 0.997 | 0.986 | 9.94E-238 | 9 |
| C19orf84 | 1.850000e-233 | 82 | 0.790107419593233 | 0.966 | 0.585 | 5.25E-229 | 9 |
| HLA-A | 8.340000e-220 | 83 | 0.671149667338801 | 0.683 | 0.256 | 2.36E-215 | 9 |
| HOXA7 | 1.630000e-218 | 84 | 0.620764139007692 | 0.605 | 0.192 | 4.61E-214 | 9 |
| VCX | 5.980000e-218 | 85 | 0.606638678194972 | 0.995 | 0.943 | 1.69E-213 | 9 |
| HES5 | 8.900000e-201 | 86 | 0.605159454274635 | 0.619 | 0.2 | 2.52E-196 | 9 |
| RAC3 | 9.920000e-197 | 87 | 0.628159395949742 | 0.99 | 0.871 | 2.81E-192 | 9 |
| DUSP5 | 1.650000e-192 | 88 | 0.611101906398637 | 0.974 | 0.811 | 4.68E-188 | 9 |
| TUBA1A | 2.720000e-169 | 89 | 0.654925080296834 | 0.889 | 0.581 | 7.71E-165 | 9 |
| ENHO | 2.600000e-152 | 90 | 0.572742212854659 | 0.941 | 0.77 | 7.35E-148 | 9 |
| IGFBP7 | 2.310000e-113 | 91 | 4.6327582973767 | 1 | 0.033 | 6.55E-109 | 10 |
| DPEP1 | 3.750000e-99 | 92 | 2.82005331234526 | 1 | 0.038 | 1.06E-94 | 10 |
| S100A6 | 2.100000e-77 | 93 | 2.83226548899819 | 1 | 0.05 | 5.94E-73 | 10 |
| MYL9 | 8.710000e-36 | 94 | 3.12744451559672 | 0.941 | 0.105 | 2.47E-31 | 10 |
| APOE | 1.580000e-32 | 95 | 3.78854749369395 | 1 | 0.137 | 4.48E-28 | 10 |
| LGALS1 | 2.880000e-31 | 96 | 2.89626161603869 | 1 | 0.142 | 8.15E-27 | 10 |
| ACTA2 | 9.060000e-23 | 97 | 3.51927983289906 | 1 | 0.22 | 2.57E-18 | 10 |
| PTGDS | 2.240000e-20 | 98 | 6.5384192862989 | 1 | 0.259 | 6.35E-16 | 10 |
| B2M | 1.530000e-16 | 99 | 2.92420968146354 | 1 | 0.367 | 4.33E-12 | 10 |
| TMSB4X | 2.500000e-14 | 100 | 3.68818912452613 | 1 | 0.501 | 7.07E-10 | 10 |