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A Comprehensive Roadmap of Murine Spermatogenesis Defined by Single-Cell RNA-Seq

Christopher Daniel Green, Qianyi Ma, Gabriel L. Manske, Adrienne Niederriter Shami, Xianing Zheng, Simone Marini, Lindsay Moritz, Caleb Sultan, Stephen J.Gurczynski, Bethany B. Moore, Michelle D. Tallquist, Jun Z. Li, Saher Sue Hammoud, 23.08.2018

GREEN, Christopher Daniel, et al. A comprehensive roadmap of murine spermatogenesis defined by single-cell RNA-seq. Developmental cell, 2018, 46. Jg., Nr. 5, S. 651-667. e10.

Publication: https://doi.org/10.1016/j.devcel.2018.07.025
Repository: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE112393

Disclaimer

The publication A Comprehensive Roadmap of Murine Spermatogenesis Defined by Single-Cell RNA-Seq by Christopher Daniel Green, Qianyi Ma, Gabriel L. Manske, Adrienne Niederriter Shami, Xianing Zheng, Simone Marini, Lindsay Moritz, Caleb Sultan, Stephen J.Gurczynski, Bethany B. Moore, Michelle D. Tallquist, Jun Z. Li, Saher Sue Hammoud is not published under an open access license. Therefore, only content curated by the MFGA team can be shown. For abstract, images and tables please follow the link to the original publication.

Curation by the MFGA team
Relevant data sets presented in the publication have been identified. If possible, annotations (title, general information, conditions, processed tissue types and processed cell types) have been added based on information from the publication.

Data set 1: Single Cell RNA-Seq Establishes a Detailed Atlas of Cellular Heterogeneity in the Adult Mouse Testis

Transcriptome: Single-cell RNA-Sequencing

Species

Species
Mouse

Tissue Types

BRENDA tissue ontology Maturity Description Species Replicates
BTO_0001363: testis Adult adult C57BL/6J animals Mouse 6

Cell Types

Cell ontology Maturity Description Species Replicates Cells per replicate
CL_0000020: spermatogonium Adult SPG Mouse 6
CL_0000017: spermatocyte Adult SC Mouse 6
CL_0000018: spermatid Adult ST (post-meiotic haploid round) Mouse 6
CL_0000018: spermatid Adult Elongating spermatids (ES) Mouse 6
CL_0000216: Sertoli cell Adult Mouse 6
CL_0002481: peritubular myoid cell Adult Mouse 6
CL_0000178: Leydig cell Adult Mouse 6
CL_0000115: endothelial cell Adult Mouse 6
CL_0000235: macrophage Adult Mouse 6
CL_0001069: group 2 innate lymphoid cell Adult Mouse 6
CL_0008019: mesenchymal cell Adult Mouse 6