Table S1, related to Figure 4 D: Top ten DEGs Human unselected Spermatocytes
HERMANN, Brian P., et al. The mammalian spermatogenesis single-cell transcriptome, from spermatogonial stem cells to spermatids. Cell reports, 2018, 25. Jg., Nr. 6, S. 1650-1667. e8.
Publication: https://doi.org/10.1016/j.celrep.2018.10.026
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The publication The Mammalian Spermatogenesis Single-Cell Transcriptome, from Spermatogonial Stem Cells to Spermatids by Brian P. Hermann, Keren Cheng, Anukriti Singh, Lorena Roa-De La Cruz, Kazadi N. Mutoji, I-Chung Chen, Heidi Gildersleeve, Jake D. Lehle, Max Mayo, Birgit Westernströer, Nathan C. Law, Melissa J. Oatley, Ellen K. Velte, Bryan A. Niedenberger, Danielle Fritze, Sherman Silber, Christopher B. Geyer, Jon M. Oatley, John R. McCarrey is published under an open access no derivatives license: : https://creativecommons.org/licenses/by-nc-nd/4.0/. Granted rights: share — copy and redistribute the material in any medium or format. No alterations allowed. Thus, tables can not be shown in MFGA format.
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Table
| GENE | PVALUE | No | Avg_logfc | Pct.1 | Pct.2 | P_val_adj | Cluster |
|---|---|---|---|---|---|---|---|
| RNMTL1 | 2.130000e-71 | 1 | 0.804140459293672 | 0.989 | 0.682 | 4.86E-67 | 1 |
| CIAPIN1 | 3.120000e-71 | 2 | 0.790945676931447 | 1 | 0.887 | 7.09E-67 | 1 |
| C15orf48 | 2.100000e-70 | 3 | 0.765945966889212 | 1 | 0.974 | 4.77E-66 | 1 |
| UBE2C | 1.310000e-68 | 4 | 0.735485791115437 | 1 | 0.73 | 2.99E-64 | 1 |
| CCDC112 | 1.870000e-66 | 5 | 0.750766890159797 | 0.984 | 0.495 | 4.25E-62 | 1 |
| CALM2 | 4.250000e-66 | 6 | 0.959963071970162 | 1 | 0.983 | 9.67E-62 | 1 |
| YEATS4 | 1.360000e-65 | 7 | 0.811071891549624 | 1 | 0.683 | 3.09E-61 | 1 |
| STK31 | 9.180000e-64 | 8 | 0.786448623955644 | 0.989 | 0.641 | 2.09E-59 | 1 |
| AARD | 2.180000e-59 | 9 | 0.684264737728576 | 1 | 0.685 | 4.97E-55 | 1 |
| CKS2 | 7.590000e-58 | 10 | 0.805830610634608 | 0.989 | 0.836 | 1.73E-53 | 1 |
| HPSE | 6.930000e-104 | 11 | 0.646742369389912 | 0.782 | 0.103 | 1.58E-99 | 2 |
| NSA2 | 1.050000e-80 | 12 | 0.810872384554969 | 1 | 0.949 | 2.39E-76 | 2 |
| LINC00654 | 1.250000e-71 | 13 | 0.683537211532693 | 0.989 | 0.946 | 2.85E-67 | 2 |
| UQCC2 | 4.790000e-61 | 14 | 0.586173922058957 | 0.977 | 0.923 | 1.09E-56 | 2 |
| CTD-2538C1.2 | 4.010000e-60 | 15 | 0.66870471797424 | 0.994 | 0.928 | 9.12E-56 | 2 |
| TRIM36 | 9.530000e-50 | 16 | 0.550531304117779 | 0.983 | 0.945 | 2.17E-45 | 2 |
| LDHAL6A | 1.280000e-46 | 17 | 0.537175773179491 | 0.908 | 0.6 | 2.92E-42 | 2 |
| STK17A | 4.380000e-44 | 18 | 0.55957288954745 | 0.943 | 0.81 | 9.96E-40 | 2 |
| NUF2 | 1.680000e-31 | 19 | 0.529200080822451 | 0.954 | 0.676 | 3.83E-27 | 2 |
| PARK7 | 2.640000e-23 | 20 | 0.543764021089394 | 0.908 | 0.767 | 6.00E-19 | 2 |
| NPIPB15 | 1.460000e-66 | 21 | 0.829950270289991 | 0.938 | 0.432 | 3.31E-62 | 3 |
| MYH3 | 8.100000e-59 | 22 | 0.751126261806677 | 0.776 | 0.242 | 1.84E-54 | 3 |
| CNIH2 | 6.190000e-58 | 23 | 0.695116476892338 | 0.919 | 0.457 | 1.41E-53 | 3 |
| C4orf17 | 2.520000e-56 | 24 | 0.73157968418005 | 0.932 | 0.407 | 5.74E-52 | 3 |
| C4orf45 | 2.250000e-51 | 25 | 0.702081485099575 | 0.857 | 0.347 | 5.13E-47 | 3 |
| FAM229A | 5.570000e-41 | 26 | 0.721880159319279 | 0.975 | 0.826 | 1.27E-36 | 3 |
| TEX38 | 2.550000e-39 | 27 | 0.729553543742594 | 0.988 | 0.834 | 5.81E-35 | 3 |
| SMCP | 7.850000e-39 | 28 | 0.726390674784483 | 0.988 | 0.903 | 1.79E-34 | 3 |
| TMCO2 | 2.290000e-38 | 29 | 0.711948685344576 | 0.981 | 0.734 | 5.21E-34 | 3 |
| C17orf50 | 2.960000e-34 | 30 | 0.686735941153893 | 0.95 | 0.621 | 6.75E-30 | 3 |
| TMIGD3 | 4.580000e-32 | 31 | 0.348794688222395 | 0.994 | 0.937 | 1.04E-27 | 4 |
| GLIPR1L1 | 2.330000e-29 | 32 | 0.41639115416581 | 1 | 0.929 | 5.31E-25 | 4 |
| HSPA5 | 3.780000e-24 | 33 | 0.31736605895447 | 1 | 0.971 | 8.60E-20 | 4 |
| ART5 | 3.910000e-23 | 34 | 0.341644525991139 | 0.942 | 0.695 | 8.90E-19 | 4 |
| ARF1 | 1.410000e-21 | 35 | 0.30089649184007 | 1 | 0.987 | 3.20E-17 | 4 |
| HSPB9 | 1.280000e-18 | 36 | 0.319503853873709 | 0.987 | 0.917 | 2.92E-14 | 4 |
| MRPL34 | 1.680000e-17 | 37 | 0.312688297890619 | 0.994 | 0.952 | 3.83E-13 | 4 |
| ISOC2 | 1.370000e-16 | 38 | 0.283773446509015 | 1 | 0.959 | 3.11E-12 | 4 |
| RP11-244N9.6 | 8.500000e-16 | 39 | 0.332176870839494 | 0.832 | 0.544 | 1.94E-11 | 4 |
| CDRT15 | 2.410000e-12 | 40 | 0.32251638680568 | 1 | 0.697 | 5.49E-08 | 4 |
| SLC51B | 3.330000e-29 | 41 | 0.448089707930158 | 0.993 | 0.646 | 7.58E-25 | 5 |
| CDRT15L2 | 5.250000e-26 | 42 | 0.353790149920075 | 0.987 | 0.634 | 1.19E-21 | 5 |
| KB-1183D5.13 | 5.800000e-25 | 43 | 0.309430886502818 | 0.797 | 0.396 | 1.32E-20 | 5 |
| CDRT15 | 9.140000e-25 | 44 | 0.43859422515689 | 1 | 0.697 | 2.08E-20 | 5 |
| CYSTM1 | 4.230000e-24 | 45 | 0.392911419181094 | 1 | 0.854 | 9.63E-20 | 5 |
| PIFO | 7.040000e-21 | 46 | 0.321403588338672 | 1 | 0.965 | 1.60E-16 | 5 |
| BTG1 | 1.860000e-18 | 47 | 0.328783675606817 | 1 | 0.93 | 4.23E-14 | 5 |
| GOLGA6L2 | 4.060000e-18 | 48 | 0.369943071089131 | 0.948 | 0.579 | 9.24E-14 | 5 |
| C9orf116 | 1.350000e-17 | 49 | 0.328663289173346 | 1 | 0.943 | 3.08E-13 | 5 |
| LINC00643 | 2.810000e-14 | 50 | 0.349472966873795 | 1 | 0.725 | 6.40E-10 | 5 |
| MT-CO2 | 5.860000e-64 | 51 | 2.83378910418789 | 1 | 0.965 | 1.33E-59 | 6 |
| MT-CO1 | 3.440000e-63 | 52 | 2.36856420795368 | 0.993 | 0.973 | 7.84E-59 | 6 |
| MT-ND4 | 2.030000e-61 | 53 | 3.21198659367279 | 0.986 | 0.929 | 4.62E-57 | 6 |
| MT-ND1 | 7.790000e-61 | 54 | 2.62723679622808 | 1 | 0.962 | 1.77E-56 | 6 |
| MT-CO3 | 3.840000e-59 | 55 | 2.74196047705349 | 1 | 0.977 | 8.73E-55 | 6 |
| MT-ATP6 | 9.600000e-56 | 56 | 2.83321624001366 | 0.986 | 0.932 | 2.19E-51 | 6 |
| MT-ND3 | 7.290000e-54 | 57 | 2.82966001976342 | 0.993 | 0.9 | 1.66E-49 | 6 |
| TEX101 | 2.700000e-50 | 58 | 2.25542777857397 | 0.817 | 0.312 | 6.15E-46 | 6 |
| MT-ND2 | 8.830000e-50 | 59 | 2.12485706638852 | 1 | 0.982 | 2.01E-45 | 6 |
| MT-CYB | 3.210000e-47 | 60 | 2.72637093468941 | 0.993 | 0.847 | 7.32E-43 | 6 |
| GLIPR1L1 | 2.030000e-35 | 61 | 0.466974069616803 | 0.97 | 0.933 | 4.62E-31 | 7 |
| UBE2C | 6.930000e-32 | 62 | 0.515507391084738 | 0.97 | 0.744 | 1.58E-27 | 7 |
| MRPL34 | 1.820000e-26 | 63 | 0.407772704352689 | 0.978 | 0.954 | 4.14E-22 | 7 |
| RNMTL1 | 9.440000e-25 | 64 | 0.42301231794153 | 0.955 | 0.697 | 2.15E-20 | 7 |
| MYDGF | 7.200000e-24 | 65 | 0.397359985853573 | 0.97 | 0.751 | 1.64E-19 | 7 |
| RAN | 1.830000e-22 | 66 | 0.364884817615703 | 0.985 | 0.987 | 4.16E-18 | 7 |
| C16orf71 | 8.150000e-21 | 67 | 0.366683480009706 | 0.978 | 0.907 | 1.86E-16 | 7 |
| B3GALT4 | 8.000000e-20 | 68 | 0.366417539792534 | 0.94 | 0.804 | 1.82E-15 | 7 |
| PEBP1 | 7.460000e-19 | 69 | 0.377435198075536 | 0.97 | 0.929 | 1.70E-14 | 7 |
| AURKA | 8.760000e-18 | 70 | 0.359897084668293 | 0.978 | 0.91 | 1.99E-13 | 7 |
| C9orf135 | 8.430000e-31 | 71 | 0.542916835761437 | 0.992 | 0.709 | 1.92E-26 | 8 |
| CDRT15 | 1.710000e-30 | 72 | 0.561194590502642 | 0.992 | 0.705 | 3.90E-26 | 8 |
| ACTL7B | 7.030000e-30 | 73 | 0.574061547410072 | 1 | 0.745 | 1.60E-25 | 8 |
| C11orf97 | 9.550000e-30 | 74 | 0.544942739832303 | 0.992 | 0.679 | 2.17E-25 | 8 |
| LINC00643 | 2.000000e-27 | 75 | 0.549413570425638 | 0.992 | 0.732 | 4.55E-23 | 8 |
| TEX38 | 6.660000e-27 | 76 | 0.557031700889426 | 1 | 0.838 | 1.52E-22 | 8 |
| C20orf195 | 1.160000e-26 | 77 | 0.578441066537165 | 0.976 | 0.714 | 2.64E-22 | 8 |
| SWI5 | 1.790000e-26 | 78 | 0.545219641274165 | 0.992 | 0.788 | 4.08E-22 | 8 |
| C5orf49 | 2.910000e-26 | 79 | 0.529112753291346 | 0.992 | 0.697 | 6.62E-22 | 8 |
| GOLGA6L2 | 1.210000e-19 | 80 | 0.583843491290023 | 0.96 | 0.586 | 2.75E-15 | 8 |
| FAM24A | 1.150000e-69 | 81 | 1.13564931777188 | 1 | 0.328 | 2.62E-65 | 9 |
| CYLC2 | 1.660000e-60 | 82 | 1.28231943982816 | 1 | 0.604 | 3.77E-56 | 9 |
| DUSP13 | 8.150000e-59 | 83 | 1.0598256748718 | 0.981 | 0.453 | 1.86E-54 | 9 |
| SPACA3 | 6.920000e-58 | 84 | 1.09366404105338 | 1 | 0.538 | 1.58E-53 | 9 |
| FAM209A | 1.230000e-55 | 85 | 1.02349545678958 | 1 | 0.612 | 2.79E-51 | 9 |
| HMGB4 | 5.990000e-55 | 86 | 1.1271184694626 | 1 | 0.966 | 1.36E-50 | 9 |
| EQTN | 8.450000e-54 | 87 | 1.04118174092293 | 1 | 0.527 | 1.92E-49 | 9 |
| TMCO2 | 1.680000e-53 | 88 | 1.06425574749257 | 1 | 0.743 | 3.82E-49 | 9 |
| C17orf50 | 2.500000e-50 | 89 | 1.01927410527529 | 1 | 0.631 | 5.69E-46 | 9 |
| SMCP | 8.200000e-50 | 90 | 1.03024299665138 | 1 | 0.906 | 1.87E-45 | 9 |
| LRRC39 | 3.550000e-43 | 91 | 0.744530992606142 | 0.955 | 0.316 | 8.08E-39 | 10 |
| TMEM243 | 8.490000e-37 | 92 | 0.744924360122765 | 0.977 | 0.424 | 1.93E-32 | 10 |
| HMGB4 | 3.350000e-35 | 93 | 0.810174924322386 | 1 | 0.967 | 7.62E-31 | 10 |
| EQTN | 1.720000e-33 | 94 | 0.77329123537505 | 1 | 0.533 | 3.92E-29 | 10 |
| C7orf61 | 5.990000e-33 | 95 | 0.794841725876138 | 1 | 0.606 | 1.36E-28 | 10 |
| C17orf50 | 1.340000e-32 | 96 | 0.758027329405857 | 0.977 | 0.637 | 3.06E-28 | 10 |
| CLDND2 | 3.310000e-32 | 97 | 0.770014438641058 | 1 | 0.583 | 7.54E-28 | 10 |
| CYLC2 | 4.190000e-32 | 98 | 0.787706453362623 | 1 | 0.609 | 9.53E-28 | 10 |
| HMGN1 | 6.300000e-32 | 99 | 0.752656213187452 | 1 | 0.559 | 1.43E-27 | 10 |
| GOLGA6L2 | 2.140000e-18 | 100 | 0.883348450707704 | 0.932 | 0.598 | 4.86E-14 | 10 |